Biomolecular Interactions and Crystallography
The core facility provides services leading to biophysical characterization of biomolecules, to study (bio)molecular interactions and to determine structure of biomolecules via X-ray crystallography. It is equipped with the instrumentation to perform a basic characterization of physical properties of the molecules (analytical ultracentrifugation, analytical size-exclusion chromatography, dynamic light scattering, CD spectroscopy, differential scanning calorimetry, differential scanning fluorimetry, small angle X-ray scattering), to study thermodynamics and/or kinetics of interactions (isothermal titration calorimetry, surface plasmon resonance, bio-layer interferometry, microscale thermophoresis, analytical ultracentrifugation), and with a complete pipeline to determine 3D structure of biomolecules (crystallization robotics, X-ray diffractometer).
Key Equipment
- Analytical ultracentrifuges Optima AUC, ProteomLab XL-I
- Surface plasmon resonance BiaCore S200
- Bio-layer interferometer Octet RED96e
- Calorimeters Auto PEAQ-ITC, Auto PEAQ-DSC, VP-ITC, VP-DSC
- Microscale thermophoresis Monolith NT.115, Monolith NT.115 Pico
- Cell sorter CytoFLEX
- Circular dichroism spectrometer J-815 equipped with fluorescence detector
- Differential scanning fluorimeter Prometheus NT.48 with aggregation detection optics
- Analytical size-exclusion chromatograph OmniSEC with UV-VIS, RALS/LALS, RI and viscometer detectors
- Dynamic light scattering SpectroLight 600 Plate Reader, DelsaMax Core
- Rigaku BioSAXS-2000 SAXS camera for small angle X-ray scattering from solutions of biological macromolecules
- Crystallization and pipetting robotics (Phoenix, Mosquito LCP, DragonFly, epMotion, sciFLEXARRAYER)
- Automated Plate Storage and Inspection SpectroQ + SpectroLight 610 (4°C and 20°C)
- Rigaku HighFlux HomeLab™ robotized macromolecular diffraction system with ACTOR sample changer optimized for work at Cu-Kα wavelength
Expertise
- Studies of physical properties of the molecules
- Characterization of (bio)molecular interactions including thermodynamics and/or kinetics parameters
- High throughput screening and optimization of crystallization
- Collection of diffraction data from crystals of biological macromolecules at home source
Open-access
- Basic characterization of physical properties of the molecules (analytical ultracentrifugation, analytical size-exclusion chromatography, dynamic light scattering, CD spectroscopy, differential scanning calorimetry, differential scanning fluorimetry)
- Studying of thermodynamics and/or kinetics of interactions (isothermal titration calorimetry, surface plasmon resonance, bio-layer interferometry, microscale thermophoresis, analytical ultracentrifugation)
- Crystallization of biomolecules and their complexes
- In-house diffraction experiments with macromolecular crystal samples – screening, data collection
- Complex multi-step experiments as e.g. SAD/MAD diffraction measurement with Se-Met derivatives; data collection and/or solving of structures
Core Facility contact
Josef Houser – josef.houser@ceitec.cz
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More information about Core Facility Biomolecular Interactions and Crystallography and related services you can find in document Equipement and services of CIISB.